SNP Profiles matching NA 399

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	GG	CC	TT	GG	CC	CC	TT	CC	GG	CG	GG	TT	AA	CC
1._NA_670	CC	_	_	_	CC	_	TT	CC	_	CG	_	_	_	_
2._NA_670	CC	_	_	_	CC	_	TT	CC	_	CG	_	_	_	_
3._NA_670	CC	_	_	_	CC	_	TT	CC	_	CG	_	_	_	_
4._NA_670	CC	_	_	_	CC	_	TT	CC	_	CG	_	_	_	_
5._RUQ_1238	CC	_	_	_	CC	_	TT	CC	_	CG	_	_	_	_
6._RUQ_1504	GG	CC	TT	GG	CC	CC	TT	CC	GG	CC	GG	TT	AA	CC
7._GC-05-169-4-22	CC	CC	TT	GG	CC	CC	TT	CC	CC	CG	_	TT	AA	CC
8._GC-05-169-4-22	CC	CC	TT	GG	CC	CC	TT	CC	CC	CG	_	TT	AA	CC
9._GC-05-169-4-22	CC	CC	TT	GG	CC	CC	TT	CC	CC	CG	_	TT	AA	CC
10._GC-05-169-4-22	CC	CC	TT	GG	CC	CC	TT	CC	CC	CG	_	TT	AA	CC
11._RUQ_1647	CG	CC	TT	GG	CC	_	_	CC	CC	CG	_	_	_	CC
12._RUQ_1238	CC	CC	TT	GG	CC	_	_	CC	CC	CG	_	_	_	CC

	15	16	17	18	19	20	21	22	23	24	25	26
_Input profile	AC	GG	CC	CC	AA	GG	AG	CG	AA	GG	CC	CC	X_X	X_X
1._NA_670	AC	GG	_	_	AA	_	AG	CG	AA	_	CC	CC	X_X	X_X
2._NA_670	AC	GG	_	_	AA	_	AG	CG	AA	_	CC	CC	X_X	X_X
3._NA_670	AC	GG	_	_	AA	_	AG	CG	AA	_	CC	CC	X_X	X_X
4._NA_670	AC	GG	_	_	AA	_	AG	CG	AA	_	CC	CC	X_X	X_X
5._RUQ_1238	AC	GG	_	_	AA	_	AG	CG	AA	_	CC	CC	X_X	X_X
6._RUQ_1504	AA	GG	CC	CC	AA	GG	AA	GG	AA	GG	CC	CC	X_X	X_X
7._GC-05-169-4-22	AC	GG	CC	CC	AA	GG	AG	CG	AA	GG	CC	CC	X_X	X_X
8._GC-05-169-4-22	AC	GG	CC	CC	AA	GG	AG	CG	AA	GG	CC	CC	X_X	X_X
9._GC-05-169-4-22	AC	GG	CC	CC	AA	GG	AG	CG	AA	GG	CC	CC	X_X	X_X
10._GC-05-169-4-22	AC	GG	CC	CC	AA	GG	AG	CG	AA	GG	CC	CC	X_X	X_X
11._RUQ_1647	AC	GG	CC	_	AA	GG	AG	CG	AA	GG	CC	AC	X_X	X_X
12._RUQ_1238	AC	GG	CC	_	AA	GG	AG	CG	AA	GG	CC	CC	X_X	X_X

Input profile: NA_399 RUQ_1572

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Location: GBR207

Jocelyn De Wever et al., 2019

1._NA_670

92.3 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5422 5 > FP

Dapeng Zhang, 2016

2._NA_670

92.3 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5422 4 > FP

Dapeng Zhang, 2016

3._NA_670

92.3 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5422 3 > FP

Dapeng Zhang, 2016

4._NA_670

92.3 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5422 2 > FP

Dapeng Zhang, 2016

5._NA_670 RUQ_1238

92.3 %
13 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

6._NA_232 RUQ_1504

92.3 %
26 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Location: GBR207

Jocelyn De Wever et al., 2019

7._NA_670 GC-05-169-4-22

92 %
25 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP1

8._NA_670 GC-05-169-4-22

92 %
25 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP2

9._NA_670 GC-05-169-4-22

92 %
25 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP3

10._NA_670 GC-05-169-4-22

92 %
25 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5 > FP4

11._GEBP_35_/A-F_[ADI] RUQ_1647

90 %
20 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

12._NA_670 RUQ_1238

90 %
20 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP1458	2	TcSNP1439	3	TcSNP1126	4	TcSNP1111	5	TcSNP1060
6	TcSNP1041	7	TcSNP994	8	TcSNP891	9	TcSNP878	10	TcSNP872
11	TcSNP860	12	TcSNP751	13	TcSNP606	14	TcSNP602	15	TcSNP591
16	TcSNP577	17	TcSNP448	18	TcSNP413	19	TcSNP372	20	TcSNP364
21	TcSNP230	22	TcSNP226	23	TcSNP193	24	TcSNP174	25	TcSNP151
26	TcSNP144